Modeling methyl-sensitive transcription factor motifs with an
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In need of good neighbours: transcription factors require local DNA hypomethylation for target binding

SEMplMe: a tool for integrating DNA methylation effects in transcription factor binding affinity predictions, BMC Bioinformatics

Local DNA shape is a general principle of transcription factor binding specificity in Arabidopsis thaliana

Mechanistic insights into transcription factor cooperativity and its impact on protein-phenotype interactions

Toward a base-resolution panorama of the in vivo impact of cytosine methylation on transcription factor binding, Genome Biology

Predicting Preference of Transcription Factors for Methylated DNA Using Sequence Information - ScienceDirect

Quantitative Analysis of the DNA Methylation Sensitivity of Transcription Factor Complexes - ScienceDirect

SEMplMe: a tool for integrating DNA methylation effects in transcription factor binding affinity predictions, BMC Bioinformatics

Noncanonical binding of transcription factors: time to revisit specificity?

DNA methylation - Wikipedia

Sensitivity of transcription factors to DNA methylation. - Abstract - Europe PMC

SEMplMe: a tool for integrating DNA methylation effects in transcription factor binding affinity predictions, BMC Bioinformatics

Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet
Possible scenarios by which DNA methylation could impact TF binding (A)

Transcription factor binding site (TFBS) motif model. Sequences known
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